2021-09-07-ID90-110
The alignment below was constructed using MAFFT's automatic mode and overlayed with a consensus on top to act as the master sequence. Whenever possible, we first performed a cyclic rotation of all cluster members. Learn more →
Alignment
Built with MAFFT, Cyclope, and CSA
>2021-09-07_Cls_ID90_110_con
AGTTGCCGCATGGGCAAGCAAAGAAAAAACAAGGCAGGGAGGTACTTACCTGAGAAGGAGCCCCGGGGCAACTCTTCTCAGAATCCAGCGAGAGGCGTAGGAGAGA-GGGCCGCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCGAAACACCATCGATCGTCCCTTCTTCTTTTACCTCCTCCTGGCTCTTCCGATGAGACGCGACCGGTGGCATCACCTCTCGGTTCGTCTTCCAACCTGCTT-TTTGTCTATCTGAGCCTCTGCCGCGGATCCTCTCTTGAG--CCTCTGGGGAATTCTCG-
>HQ386721.1
AGTTGCCGCATGGGCAAGCAAAGAAAAAACAAGGCAGGGAGGTACTTACCTGAGAAGGAGCCCCGGGGCAACTCTTCTCAGAATCCAGCGAGAGGCGTAGGAGAGA-GGGCCGCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCGAAACACCATCGATCGTCCCTTCTTC-TTTACCTCCTCCTGGCTCTTGCTGAGACGC-CGACCGGTGGCATCACCTCTCGGTTGCTCTTCCAACCTGCTTGTTTGTCTATCTGAGCCTCTGCCGCGGATCCTCTCTTGAGCCCCTCTGGGGAATTCTCGT
>HQ386724.1
AGTTGCCGC-TAGGCAAGCAAAGAAAAAACAAGGCAGGGAGGTACTTACCTGAGAAGGAGCCCCGGGGCAACTCTTCTCAGAATCCAGCGAGAGGCGTAGGAGAGA-GGGCCGCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCGAAACACCATCGATCGTCCCTTCTTCTTTTACCTTCTCCTGGCTCTTCCGATGAGACGCGACCGGTGGCATCACCTCTCGGTTCG--TCCGACCTCCGTT-TTTGTCTATCTGAGCCTCTGCCGCGGATCCTCTCTTGAG--CCTCTGGGGAATTCTCG-
>HQ386726.1
AGTTGCCGCATGGGCAAGCAAAGAAAAAACAAGGCAGGGAGGTACTTACCTGAGAAGGAGCCCCGGGGCAACTCTTCTCAGAATCCAGCGAGAGGCGTAGGAGAGA-GGGCCGCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCGAAACACCATCGATCGTCCCTTCTTCTTTTACCTCCTTCTGGCTCTTCCGATGAGACGCGACCGGTGGCATCACCTCTCGGTTCGTCTTCCAACCTGCTT-TTTGTCTATCTGAGCCTCTGCCGCGGATCCTCTCTTGAG--CCTCTGGGGAATTCTCG-
>HQ386727.1
AGTTGCCGCATGGGCAAGCAAAGAAAAAACAAGGCAGGGAGGTACTTACCTGAGAAGGAGCCCCGGGGCAACTCTTCTCAGAATCCAGCGAGAGGCGTAGGAGAGA-GGGCCGCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCGAAACACCATCGATCGTCCCTTCTTC-TTTACCTCCTTCTGGCTCTTCCGATGAGACGCGACCGGTGGCATCACCTCTCGGTTCGTCTTCCAACCTGCTT-TTTGTCTATCTGAGCCTCTGCCGCGGATCCTCTCTTGAG--CCTCTGGGGAATTCTCG-
>HQ386728.1
AGTTGCCGCATGGGCAAGCAAAGAAAAAACAAGGCAGGGAGGTACTTACCTGAGAAGGAGCCCCGGGGCAACTCTTCTCAGAATCCAGCGAGAGGCGTAGGAGAGACGGGCCGCGGTGCTCTGGAGTAGAGGCTTCTTGCTTCGAAACACCATCGATCGTCCCTTCTTCTTTTACCTTCTCCTGGCTCTTCCGATGAGACGCGACCGGTGGCATCACCTCTCGGTTCG--TTCCAACCTGCTT-TTTGTCTATCTGAGCCTCTGCCGCGGATCCTCTCTTGAGCCCCTCTGGGGAATTCTCG-
Circular Alignment
Generated by CSA
Due an error, we were unable to generate a visualization of the cluster. Find out why →
Blocks
Which aligned sequence regions are where
