2021-09-07-ID90-100
The alignment below was constructed using MAFFT's automatic mode and overlayed with a consensus on top to act as the master sequence. Whenever possible, we first performed a cyclic rotation of all cluster members. Learn more →
Alignment
Built with MAFFT, Cyclope, and CSA
>2021-09-07_Cls_ID90_100_con
-CTTCCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATCGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCCGCCTGAGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTAAAGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>NC_001830.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC--GAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGCGCTGGCTGGAGCGCGCGGCTGTG-AGTAATCGCTCCTTTGGAGAAGAAAACCAGCGTTGCTTCCTGCCTGAGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-CGC-TTTTTTCTTTTATAGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>KY048420.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCT-GAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATTGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCCGCCTGAGCCT-GTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTA-AGCAGCTTGGTTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>KY048421.1
-CTTTCCTGAGGTTCCTGTGGTGCCCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGCGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCT-GAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATTGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCCGCCTGAGCCT-GTCTTCTGTCCCGTTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTA-AGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>KY048422.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCT-GAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATTGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCCGCCTGAGCCT-GTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGATCACCGCCGAAG-GCC-TTTTTTCTTTTA-AGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTGCCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>KY048423.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGGCCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCT-GAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATTGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCCGCCTGAGCCT-GTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTA-AGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>KY048424.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-GAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCT-GAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATTGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCCGCCTGAGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTATAGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>KY048425.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAGGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCT-GAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATTGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCCGCCTGAGCCT-GTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTA-AGCAGTTCGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>KY048426.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCT-GAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATTGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCCGCCTGAGCCT-GTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTA-AGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>KY048427.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCT-GAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATTGCTCCTCTGGAGAAGAAAACCGGCGTTGCTTCCCGCCTGAGCCT-GTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTCTTCTTTAA-AGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>KY048428.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCT-GAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATTGCTCCTCTGGAGAAGAAAACCAGCGTTGTTTCCCGCCTGAGCCT-GTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTA-AGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>KY048429.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCT-GAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATTGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCCGCCTGAGCCT-GTCTTCTGTCCCGCCAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTA-AGCAGCTTGGTTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>KT183370.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCT-GAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATTGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCCGCCTGAGCCT-GTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-ACC-TTTTTTCTTTTA-AGCAGCTTGGTTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>KT183372.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCT-GAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATTGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCCGCCTGAGCCT-GTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTA-AGCAGCTTGGTTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCAGGTCC
>KT183373.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCT-GAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATTGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCCGCCTGAGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTA-AGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>HM233932.1
CTTTCCTTGAGGTTCCTGTGGTACTCCCCTGACCTGCATTCCAAAACGC--AAAAAAGTGAGAGGCCCTA-AGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCAGGGCGCTGGCTGGAGCGCGCGGCTGTG-AGTAATCGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCTGCCTGAGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTA-AGCTGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTC-
>HM233933.1
CTTTCCTTGAGGTTCCTGTGGTACTCCCCTGACCTGCATTCCAAAACGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCAGGGCGCTGGCTGGAGCGCGCGGCTGTG-AGTAATCGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCTGCCTGAGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTA-AGCTGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTC-
>HM233934.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-GAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATCGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCCGCCTGAGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTATAGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>HM233935.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-GAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATCGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCCGCCTGAGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTAAAGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>HM233936.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATTGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCCGCCTGAGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTA-AGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>HM233937.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-GAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATTGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCCGCCTGAGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTATAGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>GU825968.1
CTTTCCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGT-CGGGCGGGAGCGCGCGGCTGTG-AGTAATCGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCTCGCCTCTTCCTCGTCTTCTGTCCCGCTAGTCGAGCTGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTGAAGCAGCTTGGCTTCGCGGCGAGGGGGAAGT--TTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTC-
>GU825969.1
CTTTCCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGT-CGGGCGGGAGCGCGCGGCTGTG-AGTAATCGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCTCGCCTCTTCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTGAAGCAGCTTGGCTTCGCGGCGAGGGGGAAGT-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTC-
>GU825970.1
CTTTCCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGT-CGGGCGGGAGCGCGCGGCTGTG-AGTAATCGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCTCGCCTCTTCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTGAAGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTC-
>GU825972.1
CTTTCCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCCAGGGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGT-CGGGCGGGAGCGCGCGGCTGTG-AGTAATCGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCTCGCCTCTTCCCCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTGAAGCAGCTTGGCTTCGCGGCGAGGGTGGAAGTTTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTC-
>GU825973.1
CTTTCCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGT-CGGGCGGGAGCGCGCGGCTGTG-AGTAATCGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCTCGCCTCTTCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTGAAGCAGCTTGGCTTCGCGGCGAGGGTGGAAT--TTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTC-
>GU825974.1
CTTTCCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGT-CGGGCGGGAGCGCGCGGCTGTG-AGTAATCGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCTCGCCTCTTCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTGAAGCAGCTTGGCTTCGCGGCGAGGGTGGAAG--TTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTC-
>GU825975.1
CTTTCCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGCAAAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGT-CGGGCGGGAGCGCGCGGCTGTG-AGTAATCGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCTCGCCTCTTCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTGAAGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTC-
>FJ974083.1
CTTTCCTTGAGGTTCCTGTGGTGCTCCCCTGACCTGCATTCCAAAACGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGG--CTGGCTGGAGCGCGCGGCTGCGCAGTGATCGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCTGCCTGAGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTA-AGCTGCTTGGTGGTGCGGCGAGGGTGGAAG-TCACCGCGGATCTCCTAGAAGGAGGCCCTCGGGTC-
>FJ974085.1
CTTTCCTTGAGGTTCCTGTGGTACTCCCCTGACCTGCATTCCAAAACGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCAACAAAGGGTCTAAAAGCCTGGGCGCTGGCTGGAGCGCGCGGCTGTG-AGTAATCGCTCCTTTGGAGAAGAAAACCAGCGTTGCTTCTCGCCTCTTCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCA-CGCCGAGG-CCT-TTTTTCTTTTGA-AGCTGCTTGGTGGTGCGGCGAGGGTGGAAG-TCACCGCGGATCTCCTAGAAGGAGGCCCTCGGGTC-
>FJ974086.1
CTTTCCTTGAGGTTCCTGTGGTACTCCCCTGACCTGCATTCCAAAACGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGCGCTGGCTGGAGCGCGCGGCTGTG-AGTAATCGCTCCTTTGGAGAAGAAAACCAGCGTTGCTTCTCGCCTCTTCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAGG-CCT-TTTTTCTTTTGA-AGCTGCTTGGTGGTGCGGCGAGGGTGGAAG-TCACCGCGGATCTCCTAGAAGGAGGCCCTCGGGTC-
>FJ974087.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCTCTGACCTGCGTTCCAAAAAGC-GAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGGAGCCAGGGCGCTGGCTGGAGCGCGCGGCTGTG-AGTAATCGCTCCTTTGGAGAAGAAAACCAGCGTTGCTTCCTGCCT-AGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTATAGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>FJ974103.1
CTTTCCTTGAGGTTCCTGTGGTACTCCCCTGACCTGCATTCCAAAACGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGCGCTGGCTGGAGCGCGCGGCTGTG-AG-AATCGCTCCTTTGGAGAAGAAAACCAGCGTTGCTTCCTGCCT-AGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTATAGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>FJ974104.1
CTTTCCTTGAGGTTCCTGTGGTACTCCCCTGACCTGCATTCCAAAACGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGCGCTGGCTGGAGCGCGCGGCTGTG-AGTAATCGCTCCTTTGGAGAAGAAAACCAGCGTTGCTTCTCGCCTGAGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTA-AGCTGCTTGGTGGTGCGGCGAGGGTGGAAG-TCACCGCGGATCTCCTAGAAGGAGGCCCTCGGGTC-
>EU932877.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-GAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATTGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCTGCCTGAGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAGCGCC-TTTTTTCTTTTATAGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>EF530209.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATTGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCCGCCTGAGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCCTTTTTTTCTTTTGAAGCAGCTTGGTTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>EF530210.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATTGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCCGCCTGAGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTGAAGCAGCTTGGTTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>EF530211.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGCGCTGGC-GGAGCACGCGGCTGTG-AGTAATTGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCCGCCTGAGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCCTTTTTTTCTTTTGAAGCAGCTTGGTTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>EF530212.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATTGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCCGCCTGAGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCCTTTTTTTCTTTTGAAGCAGCTTGGTTTCGCGACGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>DQ198084.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-GAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATCGCTCCTTTGGAGAAGAAAACCAGCGTTGCTTCCTGCCTGAGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTATAGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>DQ186640.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-GAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGCGCTGGCTGGAGCGCGCGGCTGTG-AGTAATCGCTCCTTTGGAGAAGAAAACCAGCGTTGCTTCCTGCCTGAGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTATAGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>DQ146336.1
CTTTCCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-GAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGT-CGGGCGGGAGCGCGCGGCTGTG-AGTAATCGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCTCGCCTCTTCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTATAGCAGCTTGGCTTCGCGGCGAGGGTGGAAG--TGACCGCGGACTCCTGGAAGGAGGCCCTCGGGTC-
>DQ146341.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-GAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGCGCTGGC-GGAGCGCGCGGCTGTG-AGTAATTGCTCCTCTGGAGAAGGAAACCAGCGTTGCTTCCTGCCTGAGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTATAGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>DQ146342.1
CTTTCCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGT-CGGGCGGGAGCGCGCGGCTGTG-AGTAATCGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCTCGCCTCTTCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTGAAGCAGCTTGGTTTCGCGGCGAGGGTGGAAG--TGACCGCGGACTCCTGGAAGGAGGCCCTCGGGTC-
>DQ146343.1
-CTTTCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-GAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCAGGGCGCTGGCTGGAGCGCGCGGCTGTG-AGTAATCGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCCTGCCTGAGCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTATAGCAGCTTGGCTTCGCGGCGAGGGTGGAAG-TTTACCGCGGACCCCCGAGAGGAGGCCCTCGGGTCC
>AY508474.1
CTTTCCCTGAGGTTCCTGTGGTGCTCCCCTGACCTGCGTTCCAAAAAGC-AAAAAAAGTGAGAGGCCCTA-GGGGCTTCTCGGCTCGTCGTCGACGAAGGGTCTAGAAGCCTGGGT-CGGGCGGGAGCGCGCGGCTGTG-AGTAATCGCTCCTCTGGAGAAGAAAACCAGCGTTGCTTCTCGCCTCTTCCTCGTCTTCTGTCCCGCTAGTCGAGCGGACAACCCGAGCACCGCCGAAG-GCC-TTTTTTCTTTTGAAGCAGCTTGGTTTCGCGGCGAGGGCGGAAG--TGACCGCGGACTCCTGGAAGGAGGCCCTCGGGTC-
Circular Alignment
Generated by CSA
Due an error, we were unable to generate a visualization of the cluster. Find out why →
Blocks
Which aligned sequence regions are where