2021-09-07-ID90-138
The alignment below was constructed using MAFFT's automatic mode and overlayed with a consensus on top to act as the master sequence. Whenever possible, we first performed a cyclic rotation of all cluster members. Learn more →
Alignment
Built with MAFFT, Cyclope, and CSA
>2021-09-07_Cls_ID90_138_con
GGAAACCTGGAGCGAACTGGCAATAA-GGACGGTGGGGAGTGCCCAGCGGCCGACAGGAGTAATTCCCGCCGAAACAGGGTTTTCACCCTTCCTTTCTTCGGGTGTCCTTCCT--CGCCCGCGGGACCACCCCTCGCCCCCTTTGCGCTGTCGCTTCGGATATTACCCGGTGGAAACAACTGAAGCTCCCGAGAACCGCTTTTTCTCTATCTTCT-TTGCTTCGGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCTCGGAACTAAACTCGTGGTTCCTGTGGTTCACACCTGACCTCCTGAGCAGAAAAAGAAAAAAGAAGGCGGCTCGGAGGAGCGCTTCAGGGATCCCCGG
>KY328287.1
GGAAACCTGGAGCGAACTGGCAATAA-GGACGGTGGGGAGTGCCCAGCGGCCGACAGGAGTAATTCCCGCCGAAACAGGGTTTTCACCCTTCCTTTCTTCGGGTGTCCTTCCT--CGCCCGCAGGACCACCCCTCGCCCCCTTTGCGCTGTCGCTTCGGATATTACCCGGCGGAAACAACTGAAGCTCCCGAGAACCGCTTTTTCTCTATCTTCT-TTGCTTCGGGGCGAGGGTGTTTAGCCCTTGGAACGGCAGTTGGTTCCTCGGAACTAAACTCGTGGTTCCTGTGGTTCACACCTGACCTCCTGAGCAGGAAAAGAAAAAAGAAGGCGGCTCGGAGGAGCGCTTCAGGGATCCCCGG
>KX159282.1
GGAAACCTGGAGCGAACTGGCAATAA-GGACGGTGGGGAGTGCCCTTCGGCCGACAGGAGTAATTCCCGCCGAAACAGGGCTTTCACCCTTCCTTTCTTCGGGTGTCCTTCCT--CGCCCGCGGGACCACCCCTCGCCCCCTTTGCGCTGTCGCTTCGGATATTACCCGGTGGAAACAACTGAAGCTCCCGAGAACCGCTTTTTCTCTATCTTCT-TTGCTTCGGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCTCGGAACTAAACTCGTGGTTCCTGTGGTTCACACCTGACCTCCTGAGCAGAAAAAGAAAAAAGAAGGCGGCTCGGAGGAGCGCTTCAGGGATCCCCGG
>KX159283.1
GGAAACCTGGAGCGAACTGGCAATAA-GGACGGTGGGGAGTGCCCTTCGGCCGACAGGAGTAATTCCCGCCGAAACAGGGTTTTCACCCTTCCTTTCTTCGGGTGTCCTTCCT--CGCCCGCGGGACCACCCCTCGCCCCCTTTGCGCTGCCGCTTCGGATATTACCCGGTGGAAACAACTGAAGCTCCCGAGAACCGCTTTTTCTCTATCTTCT-TTGCTTCGGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCTCGGAACTAAACTCGTGGTTCCTGTGGTTCACACCTGACCTCCTGAGCAGAAAAAGAAAAAAGAAGGCGGCTCGGAGGAGCGCTTCAGGGATCCCCGG
>KX159284.1
GGAAACCTGGAGCGAACTGGCAATAA-GGACGGTGGGGAGTGCCCAGCGGCCGACAGGAGTAATTCCCGCCGAAACAGGGTTTTCACCCTTCCTTTGTTCGGGTGTCTTTCCT--CGCCCGCGGGACCACCCCTCGCCCCCTTTGCGCGGTCGATTCGGATATTACCCGGGGGAAACAAGTGAAGCTCCCGAGAACCGCTTTTTCTCTATCTTTT-TTGCTTCGGGGCGAGGGTGTTTAGCCCTCGGAACCGCAGTTGGTTCCTCGGAACTAAACTCGTGGTTCATGTGGTTCACACCCGACCTCCTGAGCAGAAAAAGAAAAAAGAAGGCGGCTCGGAGGAGCGCTTCAGGGATCCCCGG
>KC707563.1
GGAAACCTGGAGCGAACTGGCAATAA--GGCGGTGGGGAGTGCCCAGCGGCCGACAGGAGTAATTCCCGCCGAAACAGGGTTTTCACCCTTCCTTTCTTCGGGTGTCCTTCCTCGCGCCCGCAGGACCACCCCTCG-CCCCTTTGCGCTGTCGCTTCGGCTACTACCCGGTGGAAACAACTGAAGCTCCCGAGAACCGCTTTTTCTCTATCTTCC-TTGCTTCGGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT-----------------------------------------------------------------------------------------ATCCCCGG
>GQ915310.1
GGAAACCTGGAGCGAACTGGCAAAAAAGGACGGTGGGGAGTGCCTAGCGGCCGACAGGAGTAATTCCCGCCGAAACAGGGTTTTCACCCTTCCTTTCTTCGGGTGTCCTTCCTCGCGCCCGCAGGACCACCCCTCGCCCCCTTTGCGCTGTCGCTTCGGCTACTACCCGGTGGAAACAACTGAAGCTCCCGAGAACCGCTTTTTCTCTATCTTCCTTTGCTTCGGGGCGAGGGTGTTTAGCCCTTGGAACC--------------------------------------------------------------------------------------------------------------
Circular Alignment
Generated by CSA
Due an error, we were unable to generate a visualization of the cluster. Find out why →
Blocks
Which aligned sequence regions are where
