2021-09-07-ID90-130
The alignment below was constructed using MAFFT's automatic mode and overlayed with a consensus on top to act as the master sequence. Whenever possible, we first performed a cyclic rotation of all cluster members. Learn more →
Alignment
Built with MAFFT, Cyclope, and CSA
>2021-09-07_Cls_ID90_130_con
CCCATACTTATGAGAGAGTGGTTACCTCTCAGCCCCTCCACCTTGGGGTGCCCTATTCGGAGCACTGCAGTTCCGATAGAAAGGCTAAGCACTTCGCAATGAAGTAAGGTGGGACTTTTCCCTAGGGTTTGAGCGGTCGAACCCAGGGGGAGTGTGATCCAGGTACCGCCGTAGAAACTGGATTACGACGCCTACCCGGGATTCAAACCCGGTCCCCCTCAGAGGTGACTCTGAGTGAAAGGTCGTGCTTAGCACACTGACGAGTTCCTGAAATGGAACGAAACCTTTCTAACCCATAAGTTTCGTCGCATCCCAGCGACTCGTCAGTGGGCTAAG
>JX478968.2
CCCATACTTATGAGAGAGTGGTTACCTCTCAGCCCCTCCACCTTGGGGTGCCCTATTCGGAGCACTGCAGTTCCGATAGAAAGGCTAAGCACTTCGCAATGAAGTAAGGTGGGACTTTTCCCTAGGGTTTGAGCGGTCGAACCCAGGGGGAGTGTGATCCAGGTACCGCCGTAGAAACTGGATTACGACGCCTACCCGGGATTCAAACCCGGTCCCCCTCAGAGGTGACTCTGAGTGAAAGGTCGTGCTTAGCACACTGACGAGTTCCTGAAATGGAACGAAACCTTTCTAACCCATAAGTTTCGTCGCATCCCAGCGACTCGTCAGTGGGCTAAG
Circular Alignment
Generated by CSA
Due an error, we were unable to generate a visualization of the cluster. Find out why →
Blocks
Which aligned sequence regions are where
Due an error, we were unable to generate a visualization of the cluster. Find out why →
| Name | Accession | Bases | Type | Family | Genus |
|---|---|---|---|---|---|
| Peach latent mosaic viroid clone 698_14_336 clone-lib P7 | JX478968.2 | 336 | viroid | Avsunviroidae | Pelamoviroid |