2021-09-07-ID90-103

The alignment below was constructed using MAFFT's automatic mode and overlayed with a consensus on top to act as the master sequence. Whenever possible, we first performed a cyclic rotation of all cluster members. Learn more →

Alignment

Built with MAFFT, Cyclope, and CSA

>2021-09-07_Cls_ID90_103_con
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAGAAAAAAAGAACGGGAGGGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCCGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTC-AACCTCCTTTTTCTCCATCC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>NC_003538.1
CGGAACTAAACTCGTGGTTCCTGTGG-TACACACCTGACC--CTGCAGCCATGCAAAAGAAAAAAGAACGGGAGGGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCTCGTGG---TCGAGGGC-GTTG-CCCTGTTCAGACAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAACCTCTT---GACCAGCGCAGGTGCTGACGCGACCGGTGGCATCACCGAG--TTGCTCG-AGCCTC-AACCTCCTTTTTCTCTATCT-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTAGGTTCCT
>MW422289.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAGAAAAAAAGAACGGGAGAAAGAGCGT-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCA-AACCTC-AATCTCCTTTTTCTTCATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>KY810771.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAGAAAAAAAGATTGGGCGGAAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCGGAGGATCTTCTGGAGC-GGGGCCCTGCTTCAGACAGGA-GTAATCCCCGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCGGGTTTCCTTCCTCTGTTG--CGGACCTCGCCCGGAG--TCTTCTCGACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG--TTGCTCA-AGCCTC-AACCGCCTTTTTCTCTATTCTGCGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>KY235369.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACCTGCTGCAGCCATGCAAAG-AAAAAAGAACGGGAGAAAGAGCGC-AAGAGCGGTCTCAGGAGTCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCAAAGCCTC-AATCTCCTTTTTCT-CATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>KM214216.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-AAAAAAGAACGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GGGCGCCCTGTTCAGACAGGA-GTAATCCCTGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTC-AACCTCCTTTTTCTCTA-TC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>KM214217.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-AAAAAAGAACGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCAGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTC-AACCTCCTTTTTCTCCA-TC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>KM214218.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-AAAAAAGAACGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GGGCGCCCTGTTCAGACAGGA-GTAATCCCCGTAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTC-AACCTCCTTTTTCTCTA-TC-TAGCTTGGTC-CCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>KM214219.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-AAAAAAGAATGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCAGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTC-AACCTCCTTTTTCTCCA-TC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>KM214220.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-AAAAAAGAACGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCAGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTC-TACCTCCTTTTTCTCTA-TC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>KM214221.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-AAAAAGGAACGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCCGTAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTC-ATCCTCCTTTTTCTCTA-TC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>HG916813.1
CGGAACTTTTCTCGTGGTTCCTGTGGTTACACACCTGACC--CTGCAGCCATGCAAAG-AAAAAAGAACGGCGGAGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGATCGCGGA---CCGAGGGC-GGAAGCCTGCTTCAGACAGGA-GTAATCCCCGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCGGGTTTCCTTCCTCTGCTT--GCGGCCTCGCCCGGAG--TCTTCGAATCCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG--TTGCTCA-AGCCTC-AATCCGCTTTTTCTTCATCT-TAGCTTGGTCTCCGGGCGAGGGTGAAAAGCCCGTGGAACCGCAGAAGGTTCCT
>KC143289.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAGAAAAAAAGAACGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCAGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCAAG-TTCGCTCA-AGCCTC-TACCTCCTTTTTCTTCATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCGTGGAACCGCAGTTGGTTCCT
>KC143290.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAGAAAAAAAGAACGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCCGTAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTC-TACCTCCTTTTTCTTCATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCGTGGAACCGCAGTTGGTTCCT
>KC143291.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAGAAAAAAAGAACGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCCGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTC-TACCTCCTTTTTCTTCATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCGTGGAACCGCAGTTGGTTCCT
>KC143292.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCGAAGAAAAAAAGAACGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCCGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTC-AACCTCCTTTTTCTTCATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCGTGGAACCGCAGTTGGTTCCT
>KC143293.1
CGGAACTAAACTCGCGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-AAAAAAGAACGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCCGCAGAAA-AGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTC-TACCTCCTTTTTCTCTA-TC-TAGCTTGGTCTCCGGGCGGGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>KC143294.1
CGGAACTAAACTCGTGGTTCCAGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAGAAAAAAAGAACGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTC-TACCTCCTTTTTCTTCATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCGTGGAACCGCAGTTGGTTCCT
>KC143295.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCGAAG-AAAAAAGAACGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCCGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-CTCGCTCA-AGCCTC-TACCTCCTTTTTCTCTA-TC-TAGCTCGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JQ362419.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAGAAAAAAAGATTGGGCGGAGGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCGGAGGATCTTCTGGAGC-GGGGCCCTGCTTCAGACAGGA-GTAATCCCCGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCGGGTTTCCTTCCTCTGTTG--CGGACCTCGCCCGGAG--TCTTCTCGACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG--TTGCTCA-AGCCTC-AACCGCCTTTTTCTCTATTCTACGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF742632.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAGAAAAAAAGAACGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCCGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTC-ATCCTCCTTTTTCTTCATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF742633.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAGAAAAAAAGAACGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCAGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTCATACCTCCTTTTTCTTCATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF742634.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAGAAAAAAAGAACGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCTGTTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTC-AACCTCCTTTTTCTTCATTC-TAGCTTGGTCTCCGGGCGAAGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF742635.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAGAAAAAAAGAACGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCCGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTC-ATCCTCCTTTTTCTTCATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF742636.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-AAAAAAGAACGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCAGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCACCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCGTCACCGAG-TTCGCTCA-AGCCTC-ATCCTCCTTTTTCTTCATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCACAGTTGGTTCCT
>JF742641.1
CGGAACTAAACTCGTGGTTCCTGTGC-TTCACACCTGACC--CTGCAGCCATGCAAAGAAAAAAAGATCGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCCGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTC-TACCTCCTTTTTCTTCATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACTGCAGTTGGTTCCC
>JF446915.1
CGGAACTAAACCCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-GAAAAAGAACGGGAGAGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCCGTAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCAAAGCCTC-AATCTCCTTTTTCT-CATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF446916.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-GAAAAAGAACGGGAGAGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCCGCAGAAACAGGGTTTGCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCAAAGCCTC-AATCTCCTTTTTCT-CATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF446917.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-GAAAAAGAACGGGAGAGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCAGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCAAAGCCTC-AATCTCCTTTTTCT-CATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF446918.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-GAAAAAGAACGGGAGAGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCCGTAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GGCCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCAAAGCCTC-AATCTCCTTTTTCT-CATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF446919.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAGAAAAAAAGAACGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCTGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTC-TACCTCCTTTTTCTTCATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF446920.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-AAAAAAGAACGGGAGAGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCAGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCAAAGCCTC-AATCTCCTTTTTCT-CATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF446921.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-AAAAAAGAACGGGAGAGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCAAAGCCTC-AATCTCC-TTTTCT-CATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGATTCCT
>JF446922.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-GAAAAAGAACGGGAGAGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCCGTTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCAAAGCCTC-AATCTCCTTTTTCT-CATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF446923.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-AAAAAAGAACGGGAGAGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCTGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCAAAGCCTC-AATCTCCTTTTTCT-CATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF446924.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CCGCAGCCATGCAAAGAAAAAAAGAACGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCAGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTC-TACCTCCTTTTTCTTCATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF446925.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-AAAAAAGAACGGGAGAGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCCGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCAAAGCCTC-AATCTCCTTTTTCT-CATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF446926.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCGCACCTGACC--CTGCAGCCATGCAAAG-AAAAAAGAACGGGAGAGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCCGTTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCAAAGCCTC-AATCTCCTTTTTCT-CATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF446927.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CCGCAGCCATGCAAAGAAAAAAAGAACGGGAGGAAGAGCGCAAGGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCAGCA-AAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTC-TACCTCCTTTTTCTTCATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF446928.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CCGCAGCCATGCAAAGAAAAAAAGAACGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTCCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTC-TACCTCCTTTTTCTTCATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF446929.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAGAAAAAAAGAACGGGAGGAAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGATCGCGGA---CCGAGGGC-GGAAGCCTGCTTCAGACAGGA-GTAATCCCAGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCGGGTTTCCTTCCTCTGCTT--GCGGCCTCGCCCGGAG--TCTTCGAATCCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG--TTGCTCA-AGCCTC-AACCTCCTTTTTCTCTATTCTACGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCGTGGAACCGCAGTTGGTTCCT
>JF446930.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAGAAAAAAAGAACGGGAGGAAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGATCGCGGA---CCGAGGGC-GGAAGCCTGCTTCAGACAGGA-GTAATCCCTGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCGGGTTTCCTTCCTCTGCTT--GCGGCCTCGCCCGGAG--TCTTCGAATCCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG--TTGCTCA-AGCCTC-AACCTCCTTTTTCTCATTTCTACGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCGTGGAACCGCAGTTGGTTCCT
>JF446931.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CCGCAGCCATGCAAAGAAAAAAAGAACGGGAGGAAGAGCGCAAAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGCTCAGACAGGA-GTAATCCCAGTAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTCGCTCA-AGCCTC-TACCTCCTTTTTCTTCATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGGACCGCAGTTGGTTCCT
>JF446932.1
CGGAACTAAACTCGTGGTCCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-GAAAAAGAACGGGAGAGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGGCAGGA-GTAATCCCCGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCAAAGCCTC-AATCTCCTTTTTCT-CATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF446934.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-GAAAAAGAACGGGAGAGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCCGTAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCAAAGCCTC-AATCTCCTTTTTCT-CATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF446936.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-GAAAAAGAACGGGAGAGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCTGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCAAAGCCTC-AATCTCCTTTTTCT-CATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF446937.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-AAAAAAGAACGGGAGAGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGACT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCAGTAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCAAAGCCTC-AATCTCCTTTTTCT-CATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF446938.1
CGGAACTAAACTCGTGGCTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-GAAAAAGAACGGGAGAGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCCGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCAGAGCCTC-AATCTCCTTTTTCT-CATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>JF446939.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-AAAAAAGAACGGGAGAGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCAGCAGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCAAAGCCTC-AATCTCCTTTTTCT-CATTC-CAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>HM043810.1
CGGAACTAAACTCGTGGTTCCTGTGG-TACACACCTGACC--CTGCAGCCATGCAAAAGAAAAAAGAACGGGAGGGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCTCGTGG---TCGAGGGC-GTAG-CCCTGTTCAGACAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAACCTCTT---GACCAGCGCAGGTGCTGACGCGACCGGTGGCATCACCGAG--TTGCTCG-AGCCTC-AACCTCCTTTTTCTCTATCT-TAGCTTGGACTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTAGGTTCCT
>HM043811.1
CGGAACTAAACTCGTGGTTCCTGTGG-TACACACCTGACC--CTGCAGCCATGCAAAAGAAAAAAGAACGGGAGGGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCTCGTGG---TCGAGGGC-GTAGCCCCTGTTCAGACAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAACCTCTT---GACCAGCGCAGGTGCTGACGCGACCGGTGGCATCACCGAG-TTTGCTCA-AGCCTC-AACCTCCTTTTTCTCTATCTGAAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTAGGTTCCT
>HM043812.1
CGGAACTAAACTCGTGGTTCCTGTGG-TACACACCTGACC--CTGCAGCCATGCAAAAGAAAAAAGAACGGGAGGGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCTCGTGG---TCGAGGGC-GTAG-CCCTGTTCAGACAGGA-GTAATCCCAGCTGAAGCAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAACCTCTT---GACCAGCGCAGGTGCTGACGCGACCGGTGGCATCACCGAG--TTGCTCG-AGCCTC-AACCTCCTTTTTCTCTATCT-TAGCTTGGACTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTAGGTTCCT
>HM043813.1
CGGAACTAAACTCGTGGTTCCTGTGG-TACACACCTGACC--CTGCAGCCATGCAAAAGAAAAAAGAACGGGAGGGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCTCGTGG---TCGAGGGC-GTAG-CCCTGTTCAGACAGGA-GTAGTCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCTCGGAACCTCTT---GACCAGCGCAGGTGCTGACGCGACCGGTGGCATCACCGAG--TTGCTCG-AGCCTC-AACCTCCTTTTTCTCTATCT-TAGCTTGGACTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTAGGTTCCT
>HM043814.1
CGGAACTAAACTCGTGGTTCCTGTGG-TACACACCTGACC--CTGCAGCCATGCAAAAGAAAAAAGAACGGGAGGAAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCTTCGGG---TCGAGGGCGGTAGCCCCTGTTCAGACAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAACCTCTT---GACCAGCGCAGGTGCTGACGCGACCGGTGGCATCACCGAG--TTGCTCG-AGCCTC-AACCTCCTTTTTCTCTATCTGAAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTAGGTTCCT
>HM043815.1
CGGAACTAAACTCGTGGTTCCTGCGG-TACACACCTGACC--CTGCAGCCATGCAAAAGAAAAAAGAACGGGAGGAAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCTTCGGG---TCGAGGGC-GTAGCCCCTGTTCAGACAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAACCTCTT---GACCAGCGCAGGTGCTGACGCGACCGGTGGCATCACCGAG--TTGCTCG-AGCCTC-AACCTCCTTTTTCTCTATCTGAAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTAGGTTCCT
>HM043816.1
CGGAACTAAACTCGTGGTTCCTGTGG-TACACACCTGACC--CTGCAGCCATGCAAAAGAAAAAAGAACGGGAGGGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCTCGTGG---TCGAGGGC-GTAGCCCCTGTTCAGACAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAACCTCTT---GACCAGCGCAGGTGCTGACGCGACCGGTGGCATCACCGAG-TTTGCTCA-AGCCTC-AACCTCCTTTTTCTCTATCTGAAGCTTGGACTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTAGGTTCCT
>HM043817.1
CGGAACTAAACTCGTGGTTCCTGTGG-TACACACCTGACC--CTGCAGCCATGCAAAAGAAAAAAGAACGGGAGGGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCTCGTGG---TCGAGGGC-GTAG-CCCTGTTCAGACAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAACCTCTT---GACCAGCGCAGGTGCTGACGCGACCGGTGGCATCACCGAG--TTGCTCG-AGCCTC-AACCTCCTTTTTCTCTATCT-TAGCTTGGACTCCAGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTAGGTTCCT
>FM995506.1
CGGAACTTTTCTCGTGGTTCCTGTGGTTACACACCTGACC--CTGCAGCCATGCAAAG-AAAAAAGAACAGCGGAGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGATCGCGGA---CCGAGGGC-GGAAGCCTGCTTCAGACAGGA-GTAATCCCCGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCGGGTTTCCTTCCTCTGCTT--GCGGCCTCGCCCGGAG--TCTTCGAATCCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG--TTGCTCA-AGCCTC-AATCCGCTTTTTCTTCAACT-TAGCTTGGTCTCCGGGCGAGGGTGAAAAGCCCGTGGAACCGCAGAAGGTTCCT
>FJ394070.1
---------------------TGTGGTTACACACCTGACC--CTGCAGCCATGCAAAG-AAAAAAGAACGGCGGAGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGATCGCGGA---CCGAGGGC-GGAAGCCTGCTTCAGACAGGA-GTAATCCCCGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCGGGTTTCCTTCCTCTGCTT--GCGGCCTCGCCCGGAG--TCTTCGAATCCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG--TTGCTCA-AGCCTC-AATCCGCTTTTTCTTCATCTTAGGCTTGGTCTCCGGGCGAGGGTGAAAAGCCCTTGGAACCGCAGTTGGGTTCC
>FJ394071.1
---------------------TGTGGTTACACACCTGACC--CTGCAGCCATGCAAAG-AAAAAAGAACGGCGGAGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGATCGCGGA---CCGAGGGC-GGAAGCCTGCTTCAGACAGGA-GTAATCCCCGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCGGGTTTCCTTCCTCTGCTT--GCGGCCTCGCCCGGAG--TCTTCGAATCCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG--TTGCTCA-AGCCTC-AATCCGCTTTTTCTTCATCTTAGGCTTGGTCTCCGGGCGAGGGTGAAAAGTGGTCTCCGGGCGAGGGTGGTTCC
>EF015581.1
CGGAACTTTTCTCGTGGTTCCTGTGGTTACACACCTGACC--CTGCAGCCATGCAAAG-AAAAAAGAACGGCGGAGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGATCGCGGA---CCGAGGGC-GGAAGCCTGCTTCAGACAGGA-GTAATCCCCGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCGGGTTTCCTTCCTCTGCTT--GCGGCCTCGCCCGGAG--TCTTCGAATCCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG-TTTGCTCA-AGCCTC-AATCCGCTTTTTCTTCAACT-TAGCTTGGTCTCCGGGCGAGGGTGAAAAGCCCGTGGAACCGCAGAAGGTTCCT
>DQ923058.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAGAAAAAAAGAACGGGAGAAAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTC---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCA-AACCTCAATTCTCCTTTTTCTTCATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>DQ923059.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAGAAAAAAAGAACGGGAGAAAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGGTAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCCGCTTCAGCGGCCTCGCCCGGAG--TCTT---GGCCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCA-AACCTC-AATCTCCTTATTCTTCATTC-TAGCTTGGTCTCCGGGCGAGGGTGTCTAGCCCTTGGAACCGCAGTTGGTTCCT
>DQ923060.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAGAAAAAAAGAACGGGAGAAAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGACGGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAG--TCTT---GACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGTGTTTCGCTCA-AACCTCAATTCTCCTTTTTCTTCATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>DQ923061.1
CGGAACTAAACTCGTGGTTCCTGCGG-TTCACACCTGACC--CTGCAGCCATGCAAAGAAAAAAAGAACGGGAGAAAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCT--TGA---CCAGTGGC-GAGCGCCCTGTTCAGATAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCCTCAGCGGCCTCGCCCGGAG--TCTT---GACCGGCGCAGGGTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCA-AACCTC-AATCTCCTTTTTCTTCATTC-TAGCTTGGTCTCCGGGCGAGGGTGTTCAGCCCTTGGAACCGCAGTTGGTTCCT
>DQ061193.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAG-AAAAAAGAACGGGAGGAAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGATCGCGGA---CCGAGGGC-GGAAGCCTGCTTCAGACAGGA-GTAATCCCCGCAGAAACAGGGTTTTCACCCTACCTTTCTTCGGGTTTCCTTCCTCTGCTT--GCGGCCTCGCCCGGAG--TCTTCGAATCCAGCGCAGGTTCTGACGCGACCGGTGGCA-CGCCGAG--TCGCTCACTGCCTC-AACCTCCTTTTTCTCTATCT--AGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>AY365230.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAGAAAAAAAGAATGGGCGGAAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCGGAGGATCTTCTGGAGC-GGGGCCCTGCTTCAGACAGGA-GTAATCCCCGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCGGGTTTCCTTCCTCTGTTG--CGGACCTCGCCCGGAG--TCTTCTCGACCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAG--TTGCTCA-AGCCTC-AACCGCCTTTTTCTCTATTCTGCGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>AY367350.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCGAAGAAAAAAGAACGGGAGAAGAAAGAGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGAGAGCGGA---CGACTGGG-CGGGGGCCTCCTCAGACAGGGTGTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCGGGTTTCCTTTCCTCAGCT-GGCGGCCTCGCCCGGAG--TCTTCTTCTCCAGCGCAGGTTCTGACGCGACCGGTGGCATCACCGAGTTTCGCTCG-AACCTC-AATCTCCTTTTTCTCTATCT--TGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>AY222072.1
CGGAACTAAACTCGTGGTTCCTGTGG-TACACACCTGACC--CTGCAGCCATGCAAAAGAAAAAAGAACGGGAGGGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCTCGTGG---TCGAGGGC-GTAGCCCCTGTTCAGACAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAACCTCTT---GACCAGCGCAGGTGCTGACGCGACCGGTGGCATCACCGAG--TTGCTCG-AGCCTC-AACCTCCTTTTTCTCTATCT-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTAGGTTCCT
>AY222073.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--CTGCAGCCATGCAAAAGAAAAAAGAACGGGAGGGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCTCGTGG---TCGAGGGC-GTAGCCCCTGTTCAGACAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAACCTCTT---GACCAGCGCAGGTGCTGACGCGACCGGTGGCATCACCGAG--TTGCTCG-AGCCTC-AACCTCCTTTTTCTCTATCT-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>AY222074.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--TCCTGAGCA--GAAAAGAAAAAAGAACGGGAGGGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCTCGTGG---TCGAGGGC-GTAGCCCCTGTTCAGACAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAACCTCTT---GACCAGCGCAGGTGCTGACGCGACCGGTGGCATCACCGAG--TTGCTCG-AGCCTC-AACCTCCTTTTTCTCTATCT-TA--CTTGCTTCGGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>AY222075.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--TCGTGGGCA--GAAAAGAAAAAAGAACGGGAGGGAGAGCGC-AAGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCTCGTGG---TCGAGGGC-GTAGCCCCTGTTCAGACAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAACCTCTT---GACCAGCGCAGGTGCTGACGCGACCGGTGGCATCACCGAG--TTGCTCG-AGCCTC-AACCTCCTTTTTCTCTATCT-TA--CTTGCCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>AY222076.1
CGGAACTAAACTCGTGGTTCCTGTGG-TACACACCTGACC--CTGCAGCCATGCAAAAGAAAAAAGA-----AGGCGGCTCGG-AGGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCTCGTGG---TCGAGGGC-GTAGCCCCTGTTCAGACAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAACCTCTT---GACCAGCGCAGGTGCTGACGCGACCGGTGGCATCACCGAG--TTGCTC----CCGA-GAACCGCTTTTTCTCTATCT-TAGCTTGGTCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTAGGTTCCT
>AY222077.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--TCCTGAGCA-------GAAAAGAAAAAAGAAGGCGGCTCGG-AGGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCTCGTGG---TCGAGGGC-GTAGCCCCTGTTCAGACAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAACCTCTT---GACCAGCGCAGGTGCTGACGCGACCGGTGGCATCACCGAG--TTGCTC----CCGA-GAACCGCTTTTTCTCTATCT-TA--CTTGCTTCGGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT
>AY222078.1
CGGAACTAAACTCGTGGTTCCTGTGG-TTCACACCTGACC--TCGTGGGCA-------GAAAAGAAAAAAGAAGGCGGCTCGG-AGGAGCGGTCTCAGGAGCCCCGGGGCAACTCAGACCGAGCGGGGTCTCGTGG---TCGAGGGC-GTAGCCCCTGTTCAGACAGGA-GTAATCCCAGCTGAAACAGGGTTTTCACCCTTCCTTTCTTCTGGTTTCCTTCCTCTGCTTCAGCGGCCTCGCCCGGAACCTCTT---GACCAGCGCAGGTGCTGACGCGACCGGTGGCATCACCGAG--TTGCTC----CCGA-GAACCGCTTTTTCTCTATCT-TA--CTTGCCTCCGGGCGAGGGTGTTTAGCCCTTGGAACCGCAGTTGGTTCCT

    

Circular Alignment

Generated by CSA

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Blocks

Which aligned sequence regions are where

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Name Accession Bases Type Family Genus
Columnea latent viroid isolate CLVd(WildType) AY222072.1 371 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate CLVd(TLeft) AY222073.1 371 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate CLVd(TLeft-Path) AY222074.1 367 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate CLVd(TLeft-Path*) AY222075.1 367 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate CLVd(Path-CCR) AY222076.1 363 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate PSTVd/CLVd AY222077.1 359 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate PSTVd*/CLVd AY222078.1 359 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate 96009271 AY365230.1 374 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate 89001013 AY367350.1 373 viroid Pospiviroidae Pospiviroid
Columnea latent viroid clone PC-2-Pa29 DQ061193.1 368 viroid Pospiviroidae Pospiviroid
Columnea latent viroid clone PQ-49 DQ923058.1 370 viroid Pospiviroidae Pospiviroid
Columnea latent viroid clone PQ-430 DQ923059.1 369 viroid Pospiviroidae Pospiviroid
Columnea latent viroid clone PQ-720 DQ923060.1 370 viroid Pospiviroidae Pospiviroid
Columnea latent viroid clone PQ-728 DQ923061.1 369 viroid Pospiviroidae Pospiviroid
Columnea latent viroid EF015581.1 371 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate 20708266 FJ394070.1 350 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate 20710799 FJ394071.1 350 viroid Pospiviroidae Pospiviroid
Columnea latent viroid, isolate 07060402, genomic RNA FM995506.1 370 viroid Pospiviroidae Pospiviroid
Columnea latent viroid, isolate CLVd-IT HG916813.1 370 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate 12 clone 1 HM043810.1 370 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate 12 clone 2 HM043811.1 373 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate 12 clone 3 HM043812.1 370 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate 12 clone 4 HM043813.1 370 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate 13 clone 1 HM043814.1 373 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate 13 clone 3 HM043815.1 372 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate 13 clone 4 HM043816.1 373 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate 14 clone 1 HM043817.1 370 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate LP1-3c1 JF446915.1 368 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate LP1-6c5 JF446916.1 368 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate LP1-12c3 JF446917.1 368 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate LP1-13c1 JF446918.1 368 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate LP1-14c1 JF446919.1 369 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate LP1-15c4 JF446920.1 368 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate LP2-1c1 JF446921.1 367 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate LP2-5c1 JF446922.1 368 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate LP2-6c1 JF446923.1 368 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate LP2-7c1 JF446924.1 369 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate LP2-8c1 JF446925.1 368 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate LP3-3c2 JF446926.1 368 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate LP4-7c1 JF446927.1 368 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate LP4-7c4 JF446928.1 369 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate CM10-6c1 JF446929.1 371 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate CM10-6c2 JF446930.1 371 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate CR11-15c1 JF446931.1 369 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate CR14-9c1 JF446932.1 368 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate LPng19-4c1 JF446934.1 368 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate NK10-10c3 JF446936.1 368 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate NK11-8c4 JF446937.1 368 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate NK11-14c3 JF446938.1 368 viroid Pospiviroidae Pospiviroid
Columnea latent viroid isolate NK11-14c5 JF446939.1 368 viroid Pospiviroidae Pospiviroid